BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B11SP1|AL427726
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1531 1677 0.0
>3x_Contig1531
Length = 8774
Score = 1677 bits (838), Expect = 0.0
Identities = 870/886 (98%), Gaps = 2/886 (0%)
Strand = Plus / Minus
Query: 1 acatcatggatgcattcagtttgaagaaagacaatcgtaagawgtttcaagataaagaga 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7828 acatcatggatgcattcagtttgaagaaagacaatcgtaagaagtttcaagataaagaga 7769
Query: 61 agctaaagaggaagcatgccactccaagcgatagaaaatacagatcactgaacaagaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7768 agctaaagaggaagcatgccactccaagcgatagaaaatacagatcactgaacaagaaag 7709
Query: 121 cagaggcagaagcacaagccgcggaagaagagaagcaatccatgactttagagtcgaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7708 cagaggcagaagcacaagccgcggaagaagagaagcaatccatgactttagagtcgaacg 7649
Query: 181 agcatagatacacatctgagctactcgaggagccagatacaggatctggcgatgaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7648 agcatagatacacatctgagctactcgaggagccagatacaggatctggcgatgaacaaa 7589
Query: 241 ttgctgtcgttactgcwaagwtcaaagagattttkttgacaaaaggcgatgagcagccct 300
|||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 7588 ttgctgacgttactgcaaagatcaaagagattttgttgacaaaaggcgatgagcagccct 7529
Query: 301 tcttaaagagcacaaccccacaagacactaccagaagattcacaaagaaacagttagaga 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7528 tcttaaagagcgcaaccccacaagacactaccagaagattcacaaagaaacagttagaga 7469
Query: 361 atatgagcgtatctgawcttaatgaactacttcttaaccgtacagtaaatgctaacgaac 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7468 atatgagcgtatctgaacttaatgaactacttcttaaccgtacagtaaatgctaacgaac 7409
Query: 421 ttccttctaaatctaawatagcacccctgttaggatctaagtcctttgawagttcctatg 480
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7408 ttccttctaaatctaaaatagcacccctgttaggatctaagtcctttgaaagttcctatg 7349
Query: 481 gaggatcaagttcagacgacaaawaccccgtcaccaccacgcacaacaatctacccctgt 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7348 gaggatcaagttcagacgacaaaaaccccgtcaccaccacgcacaacaatctacccctgt 7289
Query: 541 cgcatattccaacccctttgadagawgacgagagtttcctagacagtattatatwgwcta 600
||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||
Sbjct: 7288 cgcatattccaacccctttgaaagaagacgagagtttcctagacagtattatatagacta 7229
Query: 601 atcagcataatgcacttctttgattcctccacaatgattaagtaattgtacacaacaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7228 atcagcataatgcacttctttgattcctccacaatgattaagtaattgtacacaacaata 7169
Query: 661 cagtactgacacaacaggaagattgagtccggagttaacatcctgcgtcataccgttatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7168 cagtactgacacaacaggaagattgagtccggagttaacatcctgcgtcataccgttatg 7109
Query: 721 gctagtagatattcatgttacaacatataacagtacacaaatcacgtgactaatattata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7108 gctagtagatattcatgttacaacatataacagtacacaaatcacgtgactaatattata 7049
Query: 781 ccaaaatgatatcgatatcactttgcacgtgctgaacggtttataatcatttttgtctcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7048 ccaaaatgatatcgatatcactttgcacgtgctgaacggtttataatcatttttgtctcc 6989
Query: 841 tttctccctcaatttgc-aaatttcttaaaaatgg-acaaataagt 884
||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 6988 tttctccctcaatttgcaaaatttcttaaaaatggaacaaataagt 6943
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5575
Number of Sequences: 1807
Number of extensions: 5575
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)